Microbial communities utilizing hydrocarbons and lipids :
[Book]
members, metagenomics and ecophysiology /
editor Terry J. McGenity.
Cham :
Springer,
[2019]
1 online resource (xxiii, 352 pages)
Handbook of hydrocarbon and lipid microbiology
Springer reference
Intro; Introduction; References; Acknowledgments; Contents; About the Series Editor-in-Chief; About the Editor; Contributors; 1 Microbial Communities Responding to Deep-Sea Hydrocarbon Spills; 1 Introduction; 2 Features of Deep-Sea Hydrocarbon Spills; 2.1 Composition of Hydrocarbons in the Water Column; 2.2 Dispersant; 2.3 Temperature; 2.4 Pressure; 2.5 Nutrients and Oxygen; 3 Microbial Community Changes During Deep-Sea Hydrocarbon Spills; 3.1 Community Changes During the Deepwater Horizon Oil Spill; 3.2 Microcosm Studies; 4 Organisms; 4.1 DWH Oceanospirillales; 4.2 Cycloclasticus
1 Introduction2 Composition of Microbial Communities in Harbors; 2.1 Overall Microbial Diversity in Water and Sediments; 2.2 Hydrocarbon-Degrading Microorganisms in Harbor Environments; 2.3 Environmental Factors Shaping Microbial Communities in Harbors; 3 Functional Diversity of Harbor Communities; 4 Exploiting the Microbiota of Harbors for the Degradation of Hydrocarbons; 4.1 Water Compartment; 4.2 Sediment Compartment; 5 Research Needs; References; 6 Hydrocarbon-Degrading Microbial Communities in Natural Oil Seeps; 1 Introduction; 2 Hot Hydrocarbon Seepage in Guaymas Basin
1 Introduction2 Phototrophs and Hydrocarbon Degradation; 3 Heterotrophs Are the Major Oil Degraders; 4 Heterotrophs and Growth of Phototrophs; 5 Indirect Role of Phototrophs in Biodegradation; 6 Exudates of Phototrophs and Hydrocarbon Biodegradation; 7 Research Needs; References; 4 Microbial Ecology of Marine Environments Chronically Polluted by Petroleum; 1 Introduction; 2 Microbial Assemblages in Marine Environments Chronically Polluted by Petroleum; 3 Global Microbial Community Pattern; 4 Research Requirements; References; 5 Microbial Communities in Hydrocarbon-Polluted Harbors and Marinas
3 Cold Hydrocarbon Seepage in the Gulf of Mexico4 Deep Subsurface Habitats; 5 Hydrocarbon-Oxidizing Sulfate-Reducing Communities: The SEEP-SRB Lineages; 6 Alkane-Oxidizing Sulfate-Reducing Bacteria; 7 Short-Chain Alkane-Oxidizing Consortia; 8 Aromatics-Oxidizing Sulfate-Reducing Bacteria; 9 Methanogenic Archaea and Microbial Alkane Cracking; 10 Bacterial and Archaeal Alkane Oxidizers; 11 Research Needs; References; 7 Anaerobic Methane Oxidizers; 1 Introduction; 2 Phylogenetic Marker Genes of Anaerobic Methanotrophs; 2.1 The 16S rRNA Gene-Based Phylogeny of ANME
4.3 Colwellia4.4 Methanotrophs and Methylotrophs; 5 Research Needs; References; 2 Impact of Petroleum Contamination on Microbial Mats; 1 Introduction: General Description of Microbial Mats; 1.1 Organization and Functioning of Microbial Mats; 1.2 Analyses of Microbial Mats; 1.3 Applications of Microbial Mats; 2 Microbial Mats and Petroleum Contamination; 3 Hydrocarbon Degradation by Microbial Mats; 3.1 Role of Cyanobacteria in Hydrocarbon Degradation; 3.2 Role of Other Bacteria in Hydrocarbon Degradation; 4 Research Needs; References; 3 Phototroph-Heterotroph Oil-Degrading Partnerships
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This book provides comprehensive, authoritative discussions about microbial communities in environments that are rich in hydrocarbons, crude oil or lipids. It encompasses natural environments, such as tar sands, oil seeps and reservoirs, as well as habitats where methane is produced. Equally, the book deals with habitats that have been influenced by human activity, including oil-contaminated soils, aquifers, coast and seas. The book opens with a series of chapters considering the contemporary approaches used to investigate microbial communities.
Microbial communities utilizing hydrocarbons and lipids