عنوان

Plant bioinformatics

9781493931668 )alk. paper(

Plant bioinformatics

edited by David Edwards, University of Western Australia, School of Plant Biology, Perth, Australia

Second edition.

xi, 365 pages : illustrations )some color(

Methods in molecular biology,1064-3745 ;1374

Springer protocols

Series: Methods in molecular biology )Clifton, N.J.( ;v. 1374.1064-3745

Series: Springer protocols )Series(1949-2448

Using GenBank /Eric W. Sayers and Ilene Karsch-Mizrachi --UniProtKB/Swiss-Prot, the manually annotated section of the UniProt knowledgebase : how to use the entry view /Emmanuel Boutet ]and others[ --KEGG bioinformatics resource for plant genomics and metabolomics /Minoru Kanehisa --Plant pathway databases /Pankaj Jaiswal and Bjeorn Usadel --Plant ontology : a tool for plant genomics /Laurel Cooper and Pankaj Jaiswal --Ensembl plants : integrating tools for visualizing, mining, and analyzing plant genomics data /Dan Bolser ]and others[ --Gramene : a resource for comparative analysis of plants genomes and pathways /Marcela Karey Tello-Ruiz ]and others[ --PGSB/MIPS plant genome information resources and concepts for the analysis of complex grass genomes /Manuel Spannagl ]and others[ --MaizeGDB : the maize genetics and genomics database /Lisa Harper ]and others[ --WheatGenome.info : a resource for wheat genomics resource /Kaitao Lai --User guidelines for the brassica database : BRAD /Xiaobo Wang, Feng Cheng, and Xiaowu Wang --TAG sequence identification of genomic regions using TAGdb /Pradeep Ruperao --Short read alignment using SOAP2 /Bhavna Hurgobin --Tablet : visualizing next-generation sequence assemblies and mappings /Iain Milne ]and others[ --Analysis of genotyping-by-sequencing )GBS( data /Sateesh Kagale ]and others[ --Skim-based genotyping by sequencing using a double haploid population to call SNPs, infer gene conversions, and improve genome assemblies /Philipp Emanuel Bayer --Finding and characterizing repeats in plant genomes /Jacques Nicolas, Pierre Peterlongo, and Saebastien Tempel --Analysis of RNA-Seq data using TopHat and cufflinks /Sreya Ghosh and Chon-Kit Kenneth Chan.

Includes bibliographical references and index.

methods and protocols

Plant genetics^aElectronic information resources

Plant proteomics^aElectronic information resources

Plant biotechnology^aElectronic information resources

Plant genetics^aData processing

Bioinformatics

Plant genetics^aLaboratory manuals

Plant proteomics^aLaboratory manuals

Plant biotechnology^aLaboratory manuals

Genome, Plant

Plants^agenetics

Databases, Genetic

Computational Biology

Medical Informatics

Laboratory Manuals

Edwards, David

1967

English Book