Multiple sequence alignment -- Protein structure comparison using SAP -- Discovering patterns conserved in sets of unaligned protein sequences -- Identification of domains from protein sequences -- Third generation prediction of secondary structures -- Comparative protein structure modeling: introduction and practical examples with modeller -- A practical guide to protein structure prediction -- Derivation and testing residue-residue mean-force potentials for use in protein structure recognition -- Genetic algorithms and protein folding -- Scoring functions for ab initio protein structure prediction -- Ab initio loop modeling and its application to homology modeling -- The dead-end elimination theorem: mathematical aspects, implementation, optimizations, evaluation, and performance -- Classification of protein folds -- Modeling transmembrane helix bundles by restrained MD simulations -- Predictive models of protein-active sites -- Flexible docking of peptide ligands to proteins -- Geometrical docking algorithms: a practical approach -- Protein-protein docking: generation and filtering of complexes.
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TOPICAL NAME USED AS SUBJECT
Amino acid sequence.
Proteins-- Structure-- Mathematical models.
Models, Molecular.
Probability.
Protein Conformation.
Amino acid sequence.
Aminosäurensequenz
Chemische Struktur
Conformation des protéines.
Mathematisches Modell
Modèles moléculaires.
Molekülmodell
Probabilité.
Proteine
Protéines-- Analyse.
Proteins-- Structure-- Mathematical models.
Séquençage des acides aminés.
Séquence des acides aminés-- Modèles mathématiques.