Innovations in biomolecular modeling and simulations /
General Material Designation
[Book]
First Statement of Responsibility
edited by Tamar Schlick
.PUBLICATION, DISTRIBUTION, ETC
Place of Publication, Distribution, etc.
Cambridge :
Name of Publisher, Distributor, etc.
Royal Society of Chemistry,
Date of Publication, Distribution, etc.
c2012
PHYSICAL DESCRIPTION
Specific Material Designation and Extent of Item
2 v. :
Other Physical Details
ill. (some col.) ;
Dimensions
24 cm
SERIES
Series Title
RSC biomolecular sciences ;
Volume Designation
23-24
INTERNAL BIBLIOGRAPHIES/INDEXES NOTE
Text of Note
Includes bibliographical references and index
CONTENTS NOTE
Text of Note
v.1. Personal perspective / Harold A. Scheraga -- Fashioning NAMD, a history of risk and reward : Klaus Schulten reminisces / Lisa Pollack -- Toward biomolecular simulations with explicit inclusions of polarizability : Development of a CHARMM polarizable force field based on the classical Drude oscillator model / C.M. Baker, E. Darian and A.D. MacKerell Jr. -- Integral equation theory of biomolecules and electrolytes / Tyler Luchko, In Suk Joung and David A. Case -- Molecular simulation in the energy biosciences / Xiaolin Cheng ... [et al.] -- Enhancing the capacity of molecular dynamics simulations with trajectory fragments / Alfredo E. Cardenas and Ron Elber -- Computing reaction rates in bio-molecular systems using discrete macro-states / Eric Darve and Ernest Ryu -- Challenges in applying Monte Carlo sampling to biomolecular systems / M. Mezei -- Coarse-grain protein models / N. Ceres and R. Lavery -- Generalised multi-level coarse-grained molecular simulation and its application to myosin-V movement / William R. Taylor and Zoe Katsimitsoulia -- Top-down mesoscale models and free energy calculations of multivalent protein-protein and protein-membrane interactions in nanocarrier adhesion and receptor trafficking / Jin Liu ... [et al.] -- Studying proteins and peptides at material surfaces / Jun Feng, Gillian C. Lynch and B. Montgomery Pettitt -- Multiscale design : From theory to practice / J. Fish, V. Filonova and Z. Yuan
Text of Note
v.2. Modelling nucleic acid structure and flexibility : From atomic to mesoscopic scale / Filip Lankas -- Molecular dynamics and force field based methods for studying quadruplex nucleic acids / Shozeb M. Haider and Stephen Neidle -- Opposites attract : Shape and electrostatic complementarity in protein-DNA complexes / Robert C. Harris ... [et al.] -- Intrinsic motions of DNA polymerases underlie their remarkable specificity and selectivity and suggest a hybrid substrate binding mechanism / Meredith C. Foley, Karunesh Arora and Tamar Schlick -- Molecular dynamics structure prediction of a novel protein-DNA complex : Two HU proteins with a DNA four-way junction / Elizabeth G. Wheatley ... [et al.] -- Molecular dynamics simulations of RNA molecules / J. Sponer ... [et al.] -- The structure and folding of helical junctions in RNA / David M.J. Lilley -- Structure and dynamics of supercoiled DNA knots and catenanes / Guillaume Witz and Andrzej Stasiak -- Monte Carlo simulations of nucleosome chains to identify factors that control DNA compaction and access / Karsten Rippe, Rene Stehr and Gero Wedemann -- Sliding dynamics along DNA : A molecular perspective / Amir Marcovitz and Yaakov Levy -- Structure-based design technology CONTOUR and its application to drug discovery / Zhijie Liu ... [et al.] -- Molecular simulation in computer-aided drug design : Algorithms and applications / Robert V. Swift and Rommie E. Amaro -- Computer-aided drug discovery : Two antiviral drugs for HIV/AIDS / J. Andrew McCammon