Bioinformatics approaches for studying untranslated regions of mRNAs / Paramjeet S. Bagga -- Identification of mRNA polyadenylation sites in genomes using cDNA sequences, expressed sequence tags, an d trace / Ju Youn Lee, Ji Yeon Park, an d Bin Tian -- Bioinformatic tools for studying post-transcriptional gene regulation : the UAlbany TUTR Collection an d other informatic resources / Francis Doyle ... ]et al.[ -- In-line probing analysis of riboswitches / Elizabeth E. Regulski an d Ronald R. Breaker -- Ribotrap : targeted purification of RNA-specific RNPs from cell lysates through immunoaffinity precipitation to identify regulatory proteins an d RNAs / Dale L. Beach an d Jack D. Keene -- Advances in RIP-chip analysis : RNA-binding protein immunoprecipitation-microarray profiling / Timothy E. Baroni ... ]et al.[ -- Biosensors for RNA aptamers-protein interaction / Sara Tombelli, Maria Minunni, an d Marco Mascini -- A tethering approach to study proteins that activate mRNA turnover in human cells / Sandra L. Clement an d Jens Lykke-Andersen -- RNA analysis by biosynthetic tagging using a 4-thiouracil an d uracil phosphoribosyltransferase / Gusti M. Zeiner ... ]et al.[ -- Efficient 5' cap-dependent RNA purification : use in identifying an d studying subsets of RNA / Edyta Z. Bajak an d Curt H. Hagedorn -- Enrichment of alternatively spliced isoforms / Julian P. Venables -- In vivo methods to assess polyadenylation efficiency / Lisa K. Hague, Tyra Hall-Pogar, an d Carol S. Lutz -- Monitoring the temporal an d spatial distribution of RNA in living yeast cells / Roy M. Long an d Carl R. Urbinati -- Analysis of mRNA partitioning between the cytosol an d endoplasmic reticulum compartments of mammalian cells / Samuel B. Stephens ... ]et al.[ -- In vivo an d in vitro analysis of poly)A( length effects on mRNA translation / Jing Peng, Elizabeth L. Murray, an d Daniel R. Schoenberg -- A ribosomal density-mapping procedure to explore ribosome positions along translating mRNAs / Naama Eldad an d Yoav Arava -- Identification of changes in gene expression by quantitation of mRNA levels / Wendy M. Olivas -- Application of the Invader RNA assay to the polarity of vertebrate mRNA decay / Elizabeth L. Murray an d Daniel R. Schoenberg -- Development of an in vitro mRNA decay system in insect cells / Kevin Sokoloski, John R. Anderson, an d Jeffrey Wilusz -- Using synthetic precursor an d inhibitor miRNAs to understand miRNA function / Lance P. Ford an d Angie Cheng -- A step-by-step procedure to analyze the efficacy of siRNA using real-time PCR / Angie Cheng, Charles L. Johnson, an d Lance P. Ford.